| Protein: | gi|66792628, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 479 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|66792628, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
253.0 | [0..1] | [477..690] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MDPSLSATND PHHPPPPQFT SFPPFTNTNP FASPNHPFFT GPTAVAPPNN IHLYQAAPPQ 60
61 QPQTSPVPPH PSISHPPYSD MICTAIAALN EPDGSSKQAI SRYIERIYTG IPTAHGALLT 120
121 HHLKTLKTSG ILVMVKKSYK LASTPPPPPP TSVAPSLEPP RSDF
|
| Detection Method: |  |
| Confidence: | 1.55 |
| Match: | 1hstA |
| Description: | Histone H5, globular domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.683379929086364 | bayes_pls_golite062009 |
| transcription regulator activity | 0.16959343932447 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0949481158963694 | bayes_pls_golite062009 |
| DNA binding | 0.00746597740509714 | bayes_pls_golite062009 |
|
Region A: Residues: [165-262] |
1 11 21 31 41 51
| | | | | |
1 IVNENQPLPD PVLASSTPQT IKRGRGRPPK AKPDVVQPQP LTNGKLTWEQ SELPVSRPEE 60
61 IQIQPPQLPL QPQQPVKRPP GRPRKDGTSP TVKPAASV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [263-479] |
1 11 21 31 41 51
| | | | | |
1 SGGVETVKRR GRPPSGRAAG RERKPIVVSA PASVFPYVAN GGVRRRGRPK RVDAGGASSV 60
61 APPPPPPTNV ESGGEEVAVK KRGRGRPPKI GGVIRKPMKP MRSFARTGKP VGRPRKNAVS 120
121 VGASGRQDGD YGELKKKFEL FQARAKDIVI VLKSEIGGSG NQAVVQAIQD LEGIAETTNE 180
181 PKHMEEVQLP DEEHLETEPE AEGQGQTEAE AMQEALF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
