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View Structure Prediction Details

Protein: gi|15219591
Organism: Arabidopsis thaliana
Length: 569 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15219591.

Description E-value Query
Range
Subject
Range
gi|4204296, gi|2... - gi|4204296|gb|AAD10677.1| putative protien kinase [Arabidopsis thaliana], pir||A86170 hypothetical p...
478.0 [0..1] [569..1]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSARSWFHK FQPRDKPRKK DMFSGSTYGG GVTETTVPDG GNDTETATKL PPLGGDGEAL  60
   61 SNSTKQKVAA AKQYIENHYK E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 2shpA
Description: Tyrosine phosphatase; Tyrosine phoshatase shp-2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
insulin receptor binding 3.48393497211158 bayes_pls_golite062009
protein binding 3.19631993182765 bayes_pls_golite062009
molecular transducer activity 3.13508395312263 bayes_pls_golite062009
signal transducer activity 3.13508395312263 bayes_pls_golite062009
binding 3.12724619324809 bayes_pls_golite062009
transcription regulator activity 2.32209932468336 bayes_pls_golite062009
nucleic acid binding 2.09146786953566 bayes_pls_golite062009
DNA binding 1.92481088182068 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.85015570449703 bayes_pls_golite062009
molecular adaptor activity 1.81145713371725 bayes_pls_golite062009
kinase activity 1.78069536883109 bayes_pls_golite062009
1-phosphatidylinositol-3-kinase activity 1.65708970287678 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.59739467025045 bayes_pls_golite062009
SH3/SH2 adaptor activity 1.59474164216385 bayes_pls_golite062009
phosphoinositide 3-kinase activity 1.57712307471132 bayes_pls_golite062009
receptor binding 1.52843393025918 bayes_pls_golite062009
protein kinase activity 1.4654611643382 bayes_pls_golite062009
transcription factor activity 1.22542472051838 bayes_pls_golite062009
transferase activity 1.19152443245584 bayes_pls_golite062009
insulin-like growth factor receptor binding 0.950445630788802 bayes_pls_golite062009
sequence-specific DNA binding 0.925299895386908 bayes_pls_golite062009
ligase activity 0.898114239997595 bayes_pls_golite062009
protein binding, bridging 0.83823250804321 bayes_pls_golite062009
phosphoinositide 3-kinase regulator activity 0.688047400629641 bayes_pls_golite062009
protein complex binding 0.65988681496356 bayes_pls_golite062009
protein phosphorylated amino acid binding 0.649814096718101 bayes_pls_golite062009
enzyme regulator activity 0.456661966897198 bayes_pls_golite062009
phosphotyrosine binding 0.311079584914389 bayes_pls_golite062009
insulin receptor substrate binding 0.29798436765753 bayes_pls_golite062009
protein tyrosine kinase activity 0.206747304356052 bayes_pls_golite062009
phosphoprotein binding 0.16798254471727 bayes_pls_golite062009
cytokine receptor binding 0.16478124520484 bayes_pls_golite062009
kinase binding 0.131981353175621 bayes_pls_golite062009
kinase regulator activity 0.10704587503284 bayes_pls_golite062009
receptor signaling protein activity 0.0443241110585009 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [82-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QMKNLNERKE RRTTLEKKLA DADVCEEDQT NLMKFLEKKE TEYMRLQRHK MGADDFELLT  60
   61 MIGKGAFGEV RVVREINTGH VFAMKKLKKS EMLRRGQVEH VRAERNLLAE VDSNCIVKLY 120
  121 CSFQDNEYLY LIMEYLPGGD MMTLLMRKDT LSEDEAKFYI AESVLAIESI HNRNYIHRDI 180
  181 KPDNLLLDRY GHLRLSDFGL CKPLDCSVID GEDFTVGNAG SGGGSESVST TPKRSQQEQL 240
  241 EHWQKNRRML AYSTVGTPDY IAPEVLLKKG YGMECDWWSL GAIMYEMLVG YPPFYADDPM 300
  301 STCRKIVNWK THLKFPEESR LSRGARDLIG KLLCSVNQRL GSTGASQIKA HPWFEGVQWE 360
  361 KIYQMEAAFI PEVNDDLDTQ NFEKFDEEDN QTQAPSRTGP WRKMLSSKDI NFVGYTYKNF 420
  421 EIVNDYQVPG IAELKKKESK SKRPSVKSLF ESESDSSSSG SEQQTINRSY SNPTPRGMEP 480
  481 NLRRLDSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.30103
Match: 2esmA
Description: Crystal Structure of ROCK 1 bound to fasudil
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle