| Protein: | gi|109946597, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 425 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|109946597, gi....
| Description | E-value | Query Range |
Subject Range |
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353.0 | [0..1] | [345..24] |
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311.0 | [0..26] | [423..5] |
|
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295.0 | [0..90] | [416..1] |
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295.0 | [0..90] | [416..1] |
|
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294.0 | [0..93] | [416..2] |
|
|
294.0 | [0..94] | [418..2] |
|
|
293.0 | [0..88] | [408..2] |
|
|
293.0 | [0..93] | [423..2] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MTLHLYHHSR FLWRNLCFPR SVGNLCNRNC SLISPSLARS AKYYCSSVAV SEFSNEAASG 60
61 STLTSISEDV TPQSIKYPFK SEERVASTAA SSN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.479 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.479 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.413 | a.77.1 | DEATH domain |
| View | Download | 0.413 | a.77.1 | DEATH domain |
| View | Download | 0.411 | a.39.1 | EF-hand |
| View | Download | 0.393 | a.186.1 | Description not found. |
| View | Download | 0.375 | b.85.2 | Head decoration protein D (gpD, major capsid protein D) |
| View | Download | 0.374 | a.3.1 | Cytochrome c |
| View | Download | 0.374 | a.3.1 | Cytochrome c |
| View | Download | 0.352 | a.76.1 | Iron-dependent represor protein, dimerization domain |
|
Region A: Residues: [94-425] |
1 11 21 31 41 51
| | | | | |
1 GRVMLIDGTS IIYRAYYKLL ARLNHGHLAH ADGNADWVLT IFSSLSLLID VLKFLPSHVA 60
61 VVFDHDGVPY GTTSNSSTGY RSAKGMNFRH TLYPAYKSNR PPTPDTIVQG LQYLKASIKA 120
121 MSIKVIEVPG VEADDVIGTL AMRSISAGFK VRVVSPDKDF FQILSPSLRL LRLTPRGSEM 180
181 ASFGMEDFAK KFGNLEPAQF VDIIALAGDK SDNIPGVDGI GNVHAVELIS RFGTLENLLQ 240
241 SVDEIKEGKI KESLIASADQ AILSKKLALL RSDLPDYIVP FDTKDLTFKK PEDNGEKLSS 300
301 LLIAIADYAE GFSADPVIRR AFRLWEKLEA VP
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| Detection Method: | |
| Confidence: | 70.221849 |
| Match: | 1bgxT |
| Description: | 5' to 3' exonuclease domain of DNA polymerase Taq; Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment) |
Matching Structure (courtesy of the PDB): |
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