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Protein Overview: gi|238480047, gi...

General Information:
Name(s) found: gi|42572637 [NCBI NR]
gi|238480047 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|42572637|ref|NP_974414.1| 5'-3' exonuclease/ DNA binding / catalytic/ nuclease [Arabidopsis thaliana] [NCBI NR]
  • gi|238480047|ref|NP_001154673.1| 5'-3' exonuclease family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNVFPPLRL NALLLHDSTF SDVMTLHLYH HSRFLWRNLC FPRSVGNLCN RNCSLISPSL  60
   61 ARSAKYYCSS VAVSEFSNEA ASGSTLTSIS EDVTPQSIKY PFKSEERVAS TAASSNGRVM 120
  121 LIDGTSIIYR AYYKLLARLN HGHLAHADGN ADWVLTIFSS LSLLIDVLKF LPSHVAVVFD 180
  181 HDGMNFRHTL YPAYKSNRPP TPDTIVQGLQ YLKASIKAMS IKVIEVPGVE ADDVIGTLAM 240
  241 RSISAGFKVR VVSPDKDFFQ ILSPSLRLLR LTPRGSEMAS FGMEDFAKKF GNLEPAQFVD 300
  301 IIALAGDKSD NIPGVDGIGN VHAVELISRF GTLENLLQSV DEIKEGKIKE VSEQVLQRLG 360
  361 KLVLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] deduced N/A No confident structure predictions are available.
    2 View Details [117..365] PSI-BLAST 63.154902 5' to 3' exonuclease domain of DNA polymerase Taq; Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle