YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|14277743, gi\|...
Organism:	Saccharomyces cerevisiae
Length:	160 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14277743, gi|....

Description	E-value	Query Range	Subject Range
gi\|14277750, gi\|... - gi\|14277750\|pdb\|1I1D\|D Chain D, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p, gi\|142777...	121.0	[0..1]	[160..2]
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	111.0	[0..7]	[160..3]
Y1207_METJA, YC0... - (Q58604) Hypothetical acetyltransferase MJ1207 (EC 2.3.1.-), Uncharacterized N-acetyltransferase MJ1... Y1207_METJA - Uncharacterized N-acetyltransferase MJ1207 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM...	110.0	[0..3]	[160..70]
gi\|88795965, gi\|... - gi\|88795965\|ref\|ZP_01111652.1\| putative N-acetyltransferase [Alteromonas macleodii 'Deep ecotype'], ...	109.0	[0..4]	[159..1]
gi\|146295284, gi... - gi\|82500547\|ref\|ZP_00885956.1\| Ribosomal-protein-alanine acetyltransferase [Caldicellulosiruptor sac...	108.0	[0..4]	[159..1]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	108.0	[0..7]	[160..2]
gi\|62424656 - gi\|62424656\|ref\|ZP_00379799.1\| COG0454: Histone acetyltransferase HPA2 and related acetyltransferase...	107.0	[0..8]	[159..1]

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Predicted Domain #1

Region A:
Residues: [1-160]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SMSLPDGFYI RRMEEGDLEQ VTETLKVLTT VGTITPESFC KLIKYWNEAT VWNDNEDKKI  60
   61 MQYNPMVIVD KRTETVAATG NIIIERKIIH ELGLCGHIED IAVNSKYQGQ GLGKLLIDQL 120
  121 VTIGFDYGCY KIILDCDEKN VKFYEKCGFS NAGVEMQIRK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.045757
Match:	1i1dA
Description:	Glucosamine-phoshate N-acetyltransferase GNA1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
transferase activity	2.42798083712145	bayes_pls_golite062009
glucosamine 6-phosphate N-acetyltransferase activity	1.9998327970246	bayes_pls_golite062009
catalytic activity	1.97933499002461	bayes_pls_golite062009
N-acyltransferase activity	1.67458301402479	bayes_pls_golite062009
N-acetyltransferase activity	1.48038364316264	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.47571666298157	bayes_pls_golite062009
acyltransferase activity	1.47230586550141	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.42711272311757	bayes_pls_golite062009
histone acetyltransferase activity	0.96927652220298	bayes_pls_golite062009
lysine N-acetyltransferase activity	0.96927652220298	bayes_pls_golite062009
acetyltransferase activity	0.823367673029436	bayes_pls_golite062009
nucleic acid binding	0.707651383188015	bayes_pls_golite062009
binding	0.476482789192409	bayes_pls_golite062009
transcription regulator activity	0.441934451407805	bayes_pls_golite062009
transcription factor binding	0.15500618063483	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: