| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.672923979871] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cytoplasmic mRNA processing body | 5.3053E-6 | 2 | 15 | 2 | 6292 |
| ribonucleoprotein complex | 6.6615E-3 | 2 | 514 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mRNA catabolic process | 1.1854E-4 | 2 | 69 | 2 | 6292 |
| RNA catabolic process | 1.5966E-4 | 2 | 80 | 2 | 6292 |
| mRNA metabolic process | 1.1408E-3 | 2 | 213 | 2 | 6292 |
| cellular macromolecule catabolic process | 1.7674E-3 | 2 | 265 | 2 | 6292 |
| traversing start control point of mitotic cell cycle | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| macromolecule catabolic process | 2.1762E-3 | 2 | 294 | 2 | 6292 |
| response to exogenous dsRNA | 2.224E-3 | 2 | 7 | 1 | 6292 |
| response to dsRNA | 2.224E-3 | 2 | 7 | 1 | 6292 |
| deadenylation-dependent decapping of nuclear-transcribed mRNA | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| cellular catabolic process | 4.3405E-3 | 2 | 415 | 2 | 6292 |
| karyogamy involved in conjugation with cellular fusion | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| karyogamy | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| catabolic process | 6.2027E-3 | 2 | 496 | 2 | 6292 |
| G1 phase of mitotic cell cycle | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| G1 phase | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| 5'-3' exoribonuclease activity | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| recombinase activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| m7G(5')pppN diphosphatase activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| 5'-3' exonuclease activity | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 8.248E-3 | 2 | 26 | 1 | 6292 |
| exoribonuclease activity | 8.248E-3 | 2 | 26 | 1 | 6292 |
| deoxyribonuclease activity | 9.1975E-3 | 2 | 29 | 1 | 6292 |