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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.07] [SVM Score: 0.811224640826]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
TOM20
  • integral to mitochondrial outer membrane
  • mitochondrion
  • mitochondrial outer membrane
  • mitochondrial outer membrane translocase complex
    		•
  • protein import into mitochondrial matrix
    		•
  • protein transporter activity
    		•
    TOM71
  • integral to mitochondrial outer membrane
  • mitochondrion
  • mitochondrial outer membrane
    		•
  • biological_process
    		•
  • protein transporter activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    integral to mitochondrial outer membrane 3.9411E-6 2 13 2 6292
    intrinsic to mitochondrial outer membrane 3.9411E-6 2 13 2 6292
    integral to mitochondrial membrane 4.5979E-6 2 14 2 6292
    integral to organelle membrane 1.051E-4 2 65 2 6292
    intrinsic to organelle membrane 1.151E-4 2 68 2 6292
    mitochondrial outer membrane 2.1151E-4 2 92 2 6292
    mitochondrial membrane part 2.5011E-4 2 100 2 6292
    outer membrane 7.9595E-4 2 178 2 6292
    organelle outer membrane 7.9595E-4 2 178 2 6292
    integral to membrane 1.6363E-3 2 255 2 6292
    intrinsic to membrane 1.7276E-3 2 262 2 6292
    mitochondrial membrane 1.7808E-3 2 266 2 6292
    mitochondrial envelope 2.4514E-3 2 312 2 6292
    mitochondrial outer membrane translocase complex 2.859E-3 2 9 1 6292
    mitochondrial part 5.6881E-3 2 475 2 6292
    envelope 6.43E-3 2 505 2 6292
    organelle envelope 6.43E-3 2 505 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    protein import into mitochondrial matrix 7.2981E-3 2 23 1 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    protein transporter activity 8.3521E-5 2 58 2 6292
    substrate-specific transporter activity 2.8436E-3 2 336 2 6292
    transporter activity 4.1132E-3 2 404 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle