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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.939698836581]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cAMP-dependent protein kinase complex 9.5344E-4 2 3 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pseudohyphal growth 1.151E-4 2 68 2 6292
cell growth 1.7194E-4 2 83 2 6292
filamentous growth of a population of unicellular organisms 2.0236E-4 2 90 2 6292
growth of unicellular organism as a thread of attached cells 2.0236E-4 2 90 2 6292
filamentous growth 2.8118E-4 2 106 2 6292
regulation of cell size 3.0847E-4 2 111 2 6292
regulation of anatomical structure size 3.2544E-4 2 114 2 6292
regulation of cellular component size 3.2544E-4 2 114 2 6292
growth 5.275E-4 2 145 2 6292
signal transduction 1.1516E-3 2 214 2 6292
signaling process 1.1841E-3 2 217 2 6292
signal transmission 1.1841E-3 2 217 2 6292
signaling 1.598E-3 2 252 2 6292
response to heat 7.6148E-3 2 24 1 6292
regulation of biological quality 7.6561E-3 2 551 2 6292
response to temperature stimulus 9.8303E-3 2 31 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cAMP-dependent protein kinase inhibitor activity 3.1786E-4 2 1 1 6292
cyclic nucleotide-dependent protein kinase activity 9.5344E-4 2 3 1 6292
cAMP-dependent protein kinase activity 9.5344E-4 2 3 1 6292
protein serine/threonine kinase inhibitor activity 1.2712E-3 2 4 1 6292
protein kinase inhibitor activity 3.4937E-3 2 11 1 6292
kinase inhibitor activity 3.4937E-3 2 11 1 6292
enzyme inhibitor activity 8.5646E-3 2 27 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle