From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.963012167703] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cellular bud neck | 4.1715E-4 | 2 | 129 | 2 | 6292 |
cellular bud | 6.9196E-4 | 2 | 166 | 2 | 6292 |
site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
cellular bud neck contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
actomyosin contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
cell division site | 8.5646E-3 | 2 | 27 | 1 | 6292 |
cell division site part | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
budding cell isotropic bud growth | 2.5415E-3 | 2 | 8 | 1 | 6292 |
reproduction | 2.7096E-3 | 2 | 328 | 2 | 6292 |
actin polymerization or depolymerization | 2.859E-3 | 2 | 9 | 1 | 6292 |
budding cell apical bud growth | 3.1764E-3 | 2 | 10 | 1 | 6292 |
intracellular mRNA localization | 3.1764E-3 | 2 | 10 | 1 | 6292 |
vacuole inheritance | 4.7627E-3 | 2 | 15 | 1 | 6292 |
cell morphogenesis involved in conjugation with cellular fusion | 6.9813E-3 | 2 | 22 | 1 | 6292 |
cell morphogenesis involved in conjugation | 7.6148E-3 | 2 | 24 | 1 | 6292 |
mitochondrion inheritance | 9.1975E-3 | 2 | 29 | 1 | 6292 |
mitochondrion distribution | 9.1975E-3 | 2 | 29 | 1 | 6292 |
mitochondrion localization | 9.5139E-3 | 2 | 30 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
actin lateral binding | 6.3568E-4 | 2 | 2 | 1 | 6292 |
actin filament binding | 3.811E-3 | 2 | 12 | 1 | 6292 |
phosphatidylinositol-3-phosphate binding | 6.0308E-3 | 2 | 19 | 1 | 6292 |
actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |
protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |