| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.13355869546] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| plasma membrane | 1.8077E-3 | 2 | 268 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| sodium ion transport | 1.5158E-7 | 2 | 3 | 2 | 6292 |
| potassium ion transport | 3.0316E-7 | 2 | 4 | 2 | 6292 |
| monovalent inorganic cation transport | 2.3495E-5 | 2 | 31 | 2 | 6292 |
| metal ion transport | 8.3521E-5 | 2 | 58 | 2 | 6292 |
| cation transport | 2.256E-4 | 2 | 95 | 2 | 6292 |
| ion transport | 3.6076E-4 | 2 | 120 | 2 | 6292 |
| response to pH | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| cellular response to glucose starvation | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| hyperosmotic response | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| response to salt stress | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| response to starvation | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| cellular response to starvation | 6.9813E-3 | 2 | 22 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.