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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 2.02032436076]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

polarisome 7.579E-7 2 6 2 6292
cell cortex part 2.304E-4 2 96 2 6292
cell cortex 2.974E-4 2 109 2 6292
site of polarized growth 7.0879E-4 2 168 2 6292
actin cap 3.811E-3 2 12 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of initiation of mating projection growth 3.0316E-7 2 4 2 6292
regulation of termination of mating projection growth 7.579E-7 2 6 2 6292
regulation of cell projection organization 1.0611E-6 2 7 2 6292
regulation of mating projection assembly 1.0611E-6 2 7 2 6292
regulation of cell projection assembly 1.0611E-6 2 7 2 6292
regulation of cell morphogenesis 1.819E-6 2 9 2 6292
mating projection assembly 2.2737E-6 2 10 2 6292
regulation of response to stimulus 2.2737E-6 2 10 2 6292
cell projection assembly 2.779E-6 2 11 2 6292
cell projection organization 2.779E-6 2 11 2 6292
regulation of anatomical structure morphogenesis 2.779E-6 2 11 2 6292
regulation of developmental process 2.779E-6 2 11 2 6292
regulation of cellular component biogenesis 7.7306E-6 2 18 2 6292
Rho protein signal transduction 9.6001E-6 2 20 2 6292
cell morphogenesis involved in conjugation with cellular fusion 1.1672E-5 2 22 2 6292
cell morphogenesis involved in conjugation 1.3945E-5 2 24 2 6292
regulation of multi-organism process 2.5061E-5 2 32 2 6292
regulation of conjugation 2.5061E-5 2 32 2 6292
regulation of conjugation with cellular fusion 2.5061E-5 2 32 2 6292
bipolar cellular bud site selection 2.8346E-5 2 34 2 6292
Ras protein signal transduction 4.1432E-5 2 41 2 6292
small GTPase mediated signal transduction 1.0186E-4 2 64 2 6292
actin filament organization 1.151E-4 2 68 2 6292
pseudohyphal growth 1.151E-4 2 68 2 6292
cytokinesis, site selection 1.3647E-4 2 74 2 6292
cellular bud site selection 1.3647E-4 2 74 2 6292
regulation of cellular component organization 1.4021E-4 2 75 2 6292
response to pheromone involved in conjugation with cellular fusion 1.44E-4 2 76 2 6292
cell cycle cytokinesis 1.5966E-4 2 80 2 6292
cell growth 1.7194E-4 2 83 2 6292
establishment of cell polarity 1.7614E-4 2 84 2 6292
establishment or maintenance of cell polarity 1.8038E-4 2 85 2 6292
asexual reproduction 2.0236E-4 2 90 2 6292
cell budding 2.0236E-4 2 90 2 6292
filamentous growth of a population of unicellular organisms 2.0236E-4 2 90 2 6292
growth of unicellular organism as a thread of attached cells 2.0236E-4 2 90 2 6292
cytokinetic process 2.1151E-4 2 92 2 6292
response to pheromone 2.3525E-4 2 97 2 6292
filamentous growth 2.8118E-4 2 106 2 6292
cellular response to chemical stimulus 2.8654E-4 2 107 2 6292
regulation of cell size 3.0847E-4 2 111 2 6292
cytokinesis 3.1407E-4 2 112 2 6292
actin cytoskeleton organization 3.1973E-4 2 113 2 6292
regulation of anatomical structure size 3.2544E-4 2 114 2 6292
regulation of cellular component size 3.2544E-4 2 114 2 6292
intracellular signal transduction 3.312E-4 2 115 2 6292
actin filament-based process 3.4287E-4 2 117 2 6292
cell morphogenesis 3.9158E-4 2 125 2 6292
conjugation with cellular fusion 3.9158E-4 2 125 2 6292
conjugation 3.979E-4 2 126 2 6292
response to organic substance 4.7071E-4 2 137 2 6292
cellular component morphogenesis 4.7763E-4 2 138 2 6292
multi-organism process 5.13E-4 2 143 2 6292
intracellular signaling pathway 5.2022E-4 2 144 2 6292
growth 5.275E-4 2 145 2 6292
cell division 5.275E-4 2 145 2 6292
reproductive developmental process 5.7222E-4 2 151 2 6292
signaling pathway 8.5067E-4 2 184 2 6292
reproductive cellular process 1.1194E-3 2 211 2 6292
reproductive process 1.1301E-3 2 212 2 6292
signal transduction 1.1516E-3 2 214 2 6292
signal transmission 1.1841E-3 2 217 2 6292
signaling process 1.1841E-3 2 217 2 6292
reproduction of a single-celled organism 1.1841E-3 2 217 2 6292
cytoskeleton organization 1.3422E-3 2 231 2 6292
sexual reproduction 1.3656E-3 2 233 2 6292
signaling 1.598E-3 2 252 2 6292
anatomical structure morphogenesis 1.6621E-3 2 257 2 6292
anatomical structure development 1.7012E-3 2 260 2 6292
cellular developmental process 1.9175E-3 2 276 2 6292
reproduction 2.7096E-3 2 328 2 6292
developmental process 2.7595E-3 2 331 2 6292
cellular response to stimulus 3.6193E-3 2 379 2 6292
response to chemical stimulus 3.6769E-3 2 382 2 6292
cellular component assembly 3.7349E-3 2 385 2 6292
cell cycle process 6.0534E-3 2 490 2 6292
cell cycle 6.95E-3 2 525 2 6292
regulation of biological quality 7.6561E-3 2 551 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytoskeletal regulatory protein binding 7.579E-7 2 6 2 6292
cytoskeletal protein binding 8.6451E-5 2 59 2 6292
protein binding 9.4468E-3 2 612 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle