| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.073] [SVM Score: 0.368101205858] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| LAG1 |
|
|
|
| WBP1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| oligosaccharyltransferase complex | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| endoplasmic reticulum | 3.3381E-3 | 2 | 364 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ceramide biosynthetic process | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| sphingoid biosynthetic process | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| ceramide metabolic process | 2.224E-3 | 2 | 7 | 1 | 6292 |
| sphingoid metabolic process | 2.859E-3 | 2 | 9 | 1 | 6292 |
| sphingolipid biosynthetic process | 6.0308E-3 | 2 | 19 | 1 | 6292 |
| membrane lipid biosynthetic process | 6.0308E-3 | 2 | 19 | 1 | 6292 |
| membrane lipid metabolic process | 9.5139E-3 | 2 | 30 | 1 | 6292 |
| sphingolipid metabolic process | 9.5139E-3 | 2 | 30 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| sphingosine N-acyltransferase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| oligosaccharyl transferase activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |