| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.074] [SVM Score: 0.370058437627] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cell projection part | 4.3504E-5 | 2 | 42 | 2 | 6292 |
| cell projection | 5.9419E-5 | 2 | 49 | 2 | 6292 |
| mating projection | 5.9419E-5 | 2 | 49 | 2 | 6292 |
| site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| mating projection base | 2.224E-3 | 2 | 7 | 1 | 6292 |
| cellular bud neck septin structure | 2.859E-3 | 2 | 9 | 1 | 6292 |
| cellular bud neck septin ring | 2.859E-3 | 2 | 9 | 1 | 6292 |
| cleavage apparatus septin structure | 2.859E-3 | 2 | 9 | 1 | 6292 |
| spore wall | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| ascospore wall | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| septin ring | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| septin cytoskeleton | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| prospore membrane | 6.0308E-3 | 2 | 19 | 1 | 6292 |
| intracellular immature spore | 6.0308E-3 | 2 | 19 | 1 | 6292 |
| ascospore-type prospore | 6.0308E-3 | 2 | 19 | 1 | 6292 |
| cell division site | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| cell division site part | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| osmosensory signaling pathway via Sho1 osmosensor | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| osmosensory signaling pathway | 6.6645E-3 | 2 | 21 | 1 | 6292 |
| cellular response to abiotic stimulus | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| cellular response to osmotic stress | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| axial cellular bud site selection | 9.1975E-3 | 2 | 29 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| osmosensor activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| phosphatidylinositol binding | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| transmembrane receptor activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| receptor activity | 4.4455E-3 | 2 | 14 | 1 | 6292 |