| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.411799579822] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| ATP14 |
|
|
|
| UPS2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | 3.811E-3 | 2 | 12 | 1 | 6292 |
| proton-transporting ATP synthase complex, coupling factor F(o) | 3.811E-3 | 2 | 12 | 1 | 6292 |
| proton-transporting two-sector ATPase complex, proton-transporting domain | 6.0308E-3 | 2 | 19 | 1 | 6292 |
| mitochondrial proton-transporting ATP synthase complex | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| proton-transporting ATP synthase complex | 6.3477E-3 | 2 | 20 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ATP synthesis coupled proton transport | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| energy coupled proton transport, down electrochemical gradient | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| ATP metabolic process | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| ATP biosynthetic process | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| purine ribonucleoside triphosphate biosynthetic process | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| purine nucleoside triphosphate biosynthetic process | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| proton transport | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| ribonucleoside triphosphate biosynthetic process | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| hydrogen transport | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| purine ribonucleoside triphosphate metabolic process | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| purine nucleoside triphosphate metabolic process | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| nucleoside triphosphate biosynthetic process | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| ribonucleoside triphosphate metabolic process | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| monovalent inorganic cation transport | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 4.7627E-3 | 2 | 15 | 1 | 6292 |