| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.434354735587] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| BRR2 |
|
|
|
| CWC21 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| U5 snRNP | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| ribonucleoprotein complex | 6.6615E-3 | 2 | 514 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| auxin biosynthetic process | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| auxin metabolic process | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| regulation of hormone levels | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| hormone metabolic process | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| hormone biosynthetic process | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| spliceosomal conformational changes to generate catalytic conformation | 2.859E-3 | 2 | 9 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ATP-dependent RNA helicase activity | 8.8811E-3 | 2 | 28 | 1 | 6292 |
| RNA-dependent ATPase activity | 9.1975E-3 | 2 | 29 | 1 | 6292 |