| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.445751499695] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| PRP43 |
|
|
|
| UTP6 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ribonucleoprotein complex | 6.6615E-3 | 2 | 514 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| maturation of SSU-rRNA | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| rRNA processing | 4.1068E-4 | 2 | 128 | 2 | 6292 |
| rRNA metabolic process | 4.7071E-4 | 2 | 137 | 2 | 6292 |
| ncRNA processing | 1.1624E-3 | 2 | 215 | 2 | 6292 |
| ncRNA metabolic process | 1.6621E-3 | 2 | 257 | 2 | 6292 |
| ribosome biogenesis | 3.0157E-3 | 2 | 346 | 2 | 6292 |
| ribonucleoprotein complex biogenesis | 3.5243E-3 | 2 | 374 | 2 | 6292 |
| RNA processing | 3.6384E-3 | 2 | 380 | 2 | 6292 |
| processing of 27S pre-rRNA | 5.0798E-3 | 2 | 16 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ATP-dependent RNA helicase activity | 8.8811E-3 | 2 | 28 | 1 | 6292 |
| RNA-dependent ATPase activity | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| snoRNA binding | 9.8303E-3 | 2 | 31 | 1 | 6292 |