From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.84017049698] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
regulation of cyclin-dependent protein kinase activity | 4.5979E-6 | 2 | 14 | 2 | 6292 |
regulation of kinase activity | 1.6421E-5 | 2 | 26 | 2 | 6292 |
regulation of protein kinase activity | 1.6421E-5 | 2 | 26 | 2 | 6292 |
regulation of transferase activity | 1.6421E-5 | 2 | 26 | 2 | 6292 |
regulation of phosphorylation | 2.3495E-5 | 2 | 31 | 2 | 6292 |
regulation of phosphate metabolic process | 3.552E-5 | 2 | 38 | 2 | 6292 |
regulation of phosphorus metabolic process | 3.552E-5 | 2 | 38 | 2 | 6292 |
regulation of catalytic activity | 4.7798E-5 | 2 | 44 | 2 | 6292 |
regulation of molecular function | 4.7798E-5 | 2 | 44 | 2 | 6292 |
regulation of cell cycle | 4.3024E-4 | 2 | 131 | 2 | 6292 |
phosphorylation | 8.0494E-4 | 2 | 179 | 2 | 6292 |
phosphorus metabolic process | 1.3191E-3 | 2 | 229 | 2 | 6292 |
phosphate metabolic process | 1.3191E-3 | 2 | 229 | 2 | 6292 |
cell cycle | 6.95E-3 | 2 | 525 | 2 | 6292 |
regulation of cellular metabolic process | 7.2445E-3 | 2 | 536 | 2 | 6292 |
regulation of metabolic process | 7.5452E-3 | 2 | 547 | 2 | 6292 |
vacuole fusion, non-autophagic | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cyclin-dependent protein kinase regulator activity | 1.6421E-5 | 2 | 26 | 2 | 6292 |
protein kinase regulator activity | 5.2295E-5 | 2 | 46 | 2 | 6292 |
kinase regulator activity | 5.9419E-5 | 2 | 49 | 2 | 6292 |
enzyme regulator activity | 1.0773E-3 | 2 | 207 | 2 | 6292 |