| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.872692819724] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| Noc4p-Nop14p complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| nuclear envelope | 9.9543E-4 | 2 | 199 | 2 | 6292 |
| Noc complex | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| preribosome, small subunit precursor | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| endomembrane system | 3.9918E-3 | 2 | 398 | 2 | 6292 |
| 90S preribosome | 5.3968E-3 | 2 | 17 | 1 | 6292 |
| envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
| organelle envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ribosome biogenesis | 3.0157E-3 | 2 | 346 | 2 | 6292 |
| ribonucleoprotein complex biogenesis | 3.5243E-3 | 2 | 374 | 2 | 6292 |
| ribosomal protein import into nucleus | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| snRNP protein import into nucleus | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| snRNA export from nucleus | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| NLS-bearing substrate import into nucleus | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| snRNA transport | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| mRNA-binding (hnRNP) protein import into nucleus | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| ribosomal small subunit biogenesis | 8.248E-3 | 2 | 26 | 1 | 6292 |
| rRNA export from nucleus | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| rRNA transport | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| nuclear pore organization | 8.8811E-3 | 2 | 28 | 1 | 6292 |
| tRNA export from nucleus | 8.8811E-3 | 2 | 28 | 1 | 6292 |
| tRNA transport | 8.8811E-3 | 2 | 28 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| snoRNA binding | 9.8303E-3 | 2 | 31 | 1 | 6292 |