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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.875174907646]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

AMP-activated protein kinase complex 1.9064E-3 2 6 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

invasive growth in response to glucose limitation 5.4619E-5 2 47 2 6292
filamentous growth of a population of unicellular organisms 2.0236E-4 2 90 2 6292
growth of unicellular organism as a thread of attached cells 2.0236E-4 2 90 2 6292
filamentous growth 2.8118E-4 2 106 2 6292
growth 5.275E-4 2 145 2 6292
positive regulation of gluconeogenesis 1.2712E-3 2 4 1 6292
cellular response to glucose starvation 1.5888E-3 2 5 1 6292
positive regulation of glucose metabolic process 2.5415E-3 2 8 1 6292
positive regulation of cellular carbohydrate metabolic process 2.5415E-3 2 8 1 6292
positive regulation of carbohydrate metabolic process 2.5415E-3 2 8 1 6292
regulation of protein complex assembly 3.4937E-3 2 11 1 6292
regulation of gluconeogenesis 5.0798E-3 2 16 1 6292
regulation of cellular component biogenesis 5.7138E-3 2 18 1 6292
regulation of cellular ketone metabolic process 5.7138E-3 2 18 1 6292
regulation of carbohydrate biosynthetic process 6.9813E-3 2 22 1 6292
cellular response to starvation 6.9813E-3 2 22 1 6292
response to starvation 6.9813E-3 2 22 1 6292
regulation of glucose metabolic process 9.1975E-3 2 29 1 6292
regulation of cellular carbohydrate metabolic process 9.1975E-3 2 29 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

AMP-activated protein kinase activity 1.9064E-3 2 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle