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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.904516069914]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
CDC12
  • cellular bud neck septin ring
  • cytoplasm
    		•
  • axial cellular bud site selection
  • bipolar cellular bud site selection
  • cell morphogenesis
  • conjugation with cellular fusion
  • cellular cell wall organization
  • cytokinesis
    		•
  • GTPase activity
  • structural constituent of cytoskeleton
  • phosphatidylinositol binding
    		•
    SPR28
  • cellular bud neck septin ring
    		•
  • cell morphogenesis
  • cellular cell wall organization
    		•
  • structural constituent of cytoskeleton
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    cellular bud neck septin structure 1.819E-6 2 9 2 6292
    cellular bud neck septin ring 1.819E-6 2 9 2 6292
    cleavage apparatus septin structure 1.819E-6 2 9 2 6292
    septin ring 5.3053E-6 2 15 2 6292
    septin cytoskeleton 5.3053E-6 2 15 2 6292
    cell division site 1.7735E-5 2 27 2 6292
    cell division site part 1.7735E-5 2 27 2 6292
    cell cortex part 2.304E-4 2 96 2 6292
    cell cortex 2.974E-4 2 109 2 6292
    cellular bud neck 4.1715E-4 2 129 2 6292
    cellular bud 6.9196E-4 2 166 2 6292
    site of polarized growth 7.0879E-4 2 168 2 6292
    cytoskeletal part 1.0156E-3 2 201 2 6292
    cytoskeleton 1.1732E-3 2 216 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    cell morphogenesis 3.9158E-4 2 125 2 6292
    cellular component morphogenesis 4.7763E-4 2 138 2 6292
    external encapsulating structure organization 7.5174E-4 2 173 2 6292
    cell wall organization 7.5174E-4 2 173 2 6292
    cellular cell wall organization 7.5174E-4 2 173 2 6292
    cellular cell wall organization or biogenesis 1.0877E-3 2 208 2 6292
    cell wall organization or biogenesis 1.0877E-3 2 208 2 6292
    anatomical structure morphogenesis 1.6621E-3 2 257 2 6292
    anatomical structure development 1.7012E-3 2 260 2 6292
    cellular developmental process 1.9175E-3 2 276 2 6292
    developmental process 2.7595E-3 2 331 2 6292
    axial cellular bud site selection 9.1975E-3 2 29 1 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    structural constituent of cytoskeleton 6.9626E-5 2 53 2 6292
    structural molecule activity 2.8947E-3 2 339 2 6292
    phosphatidylinositol binding 3.1764E-3 2 10 1 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle