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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.930704608303]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
SEC15
  • cellular bud tip
  • exocyst
    		•
  • vesicle fusion
  • bipolar cellular bud site selection
  • vesicle docking during exocytosis
  • Golgi to plasma membrane transport
  • cytokinesis
    		•
  • protein binding
    		•
    SEC5
  • incipient cellular bud site
  • cellular bud tip
  • cellular bud neck
  • exocyst
    		•
  • vesicle fusion
  • bipolar cellular bud site selection
  • vesicle docking during exocytosis
  • Golgi to plasma membrane transport
  • cytokinesis
    		•
  • protein binding
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    exocyst 1.4147E-6 2 8 2 6292
    cellular bud tip 8.0641E-5 2 57 2 6292
    cell cortex part 2.304E-4 2 96 2 6292
    cell cortex 2.974E-4 2 109 2 6292
    cellular bud 6.9196E-4 2 166 2 6292
    site of polarized growth 7.0879E-4 2 168 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    vesicle docking during exocytosis 3.3348E-6 2 12 2 6292
    membrane docking 4.5979E-6 2 14 2 6292
    vesicle docking 4.5979E-6 2 14 2 6292
    vesicle fusion 2.0514E-5 2 29 2 6292
    Golgi to plasma membrane transport 2.3495E-5 2 31 2 6292
    bipolar cellular bud site selection 2.8346E-5 2 34 2 6292
    exocytosis 5.2295E-5 2 46 2 6292
    vesicle organization 5.2295E-5 2 46 2 6292
    organelle fusion 7.2304E-5 2 54 2 6292
    secretion 7.2304E-5 2 54 2 6292
    secretion by cell 7.2304E-5 2 54 2 6292
    membrane fusion 1.1171E-4 2 67 2 6292
    cellular membrane fusion 1.1171E-4 2 67 2 6292
    post-Golgi vesicle-mediated transport 1.151E-4 2 68 2 6292
    cytokinesis, site selection 1.3647E-4 2 74 2 6292
    cellular bud site selection 1.3647E-4 2 74 2 6292
    cell cycle cytokinesis 1.5966E-4 2 80 2 6292
    establishment of cell polarity 1.7614E-4 2 84 2 6292
    establishment or maintenance of cell polarity 1.8038E-4 2 85 2 6292
    asexual reproduction 2.0236E-4 2 90 2 6292
    cell budding 2.0236E-4 2 90 2 6292
    cytokinetic process 2.1151E-4 2 92 2 6292
    cytokinesis 3.1407E-4 2 112 2 6292
    cell morphogenesis 3.9158E-4 2 125 2 6292
    cellular component morphogenesis 4.7763E-4 2 138 2 6292
    cell division 5.275E-4 2 145 2 6292
    Golgi vesicle transport 7.0879E-4 2 168 2 6292
    cellular membrane organization 9.8542E-4 2 198 2 6292
    membrane organization 9.8542E-4 2 198 2 6292
    reproduction of a single-celled organism 1.1841E-3 2 217 2 6292
    anatomical structure morphogenesis 1.6621E-3 2 257 2 6292
    anatomical structure development 1.7012E-3 2 260 2 6292
    cellular developmental process 1.9175E-3 2 276 2 6292
    reproduction 2.7096E-3 2 328 2 6292
    developmental process 2.7595E-3 2 331 2 6292
    vesicle-mediated transport 2.9119E-3 2 340 2 6292
    cell cycle process 6.0534E-3 2 490 2 6292
    cell cycle 6.95E-3 2 525 2 6292
    intracellular transport 7.7118E-3 2 553 2 6292
    establishment of localization in cell 9.0494E-3 2 599 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    protein binding 9.4468E-3 2 612 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle