From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 1.13588390231] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
BCY1 |
|
|
|
TPK2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cAMP-dependent protein kinase complex | 9.5344E-4 | 2 | 3 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
pseudohyphal growth | 1.151E-4 | 2 | 68 | 2 | 6292 |
cell growth | 1.7194E-4 | 2 | 83 | 2 | 6292 |
filamentous growth of a population of unicellular organisms | 2.0236E-4 | 2 | 90 | 2 | 6292 |
growth of unicellular organism as a thread of attached cells | 2.0236E-4 | 2 | 90 | 2 | 6292 |
filamentous growth | 2.8118E-4 | 2 | 106 | 2 | 6292 |
regulation of cell size | 3.0847E-4 | 2 | 111 | 2 | 6292 |
regulation of anatomical structure size | 3.2544E-4 | 2 | 114 | 2 | 6292 |
regulation of cellular component size | 3.2544E-4 | 2 | 114 | 2 | 6292 |
growth | 5.275E-4 | 2 | 145 | 2 | 6292 |
signal transduction | 1.1516E-3 | 2 | 214 | 2 | 6292 |
signaling process | 1.1841E-3 | 2 | 217 | 2 | 6292 |
signal transmission | 1.1841E-3 | 2 | 217 | 2 | 6292 |
signaling | 1.598E-3 | 2 | 252 | 2 | 6292 |
response to heat | 7.6148E-3 | 2 | 24 | 1 | 6292 |
regulation of biological quality | 7.6561E-3 | 2 | 551 | 2 | 6292 |
response to temperature stimulus | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cAMP-dependent protein kinase inhibitor activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
cyclic nucleotide-dependent protein kinase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
cAMP-dependent protein kinase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
protein serine/threonine kinase inhibitor activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
protein kinase inhibitor activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |
kinase inhibitor activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |
enzyme inhibitor activity | 8.5646E-3 | 2 | 27 | 1 | 6292 |