| From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
| Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Rpc40. The topolgies of protein complexes in this experiment are unknown. |
| Complex Size: | 3 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA-directed RNA polymerase I complex | 8.7719E-9 | 3 | 14 | 3 | 6292 |
| RNA polymerase complex | 1.0832E-7 | 3 | 31 | 3 | 6292 |
| nuclear DNA-directed RNA polymerase complex | 1.0832E-7 | 3 | 31 | 3 | 6292 |
| DNA-directed RNA polymerase complex | 1.0832E-7 | 3 | 31 | 3 | 6292 |
| nucleolar part | 3.4196E-7 | 3 | 45 | 3 | 6292 |
| nucleolus | 3.7195E-5 | 3 | 211 | 3 | 6292 |
| nuclear lumen | 3.709E-4 | 3 | 453 | 3 | 6292 |
| organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| intracellular organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| membrane-enclosed lumen | 1.3717E-3 | 3 | 700 | 3 | 6292 |
| non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| intracellular non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| nuclear part | 5.3751E-3 | 3 | 1103 | 3 | 6292 |
| protein complex | 5.8881E-3 | 3 | 1137 | 3 | 6292 |
| DNA-directed RNA polymerase III complex | 8.0849E-3 | 3 | 17 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| transcription from RNA polymerase I promoter | 9.784E-8 | 3 | 30 | 3 | 6292 |
| transcription, DNA-dependent | 5.081E-4 | 3 | 503 | 3 | 6292 |
| RNA biosynthetic process | 5.2344E-4 | 3 | 508 | 3 | 6292 |
| transcription | 6.7188E-4 | 3 | 552 | 3 | 6292 |
| RNA metabolic process | 3.4763E-3 | 3 | 954 | 3 | 6292 |
| cellular macromolecule biosynthetic process | 6.7003E-3 | 3 | 1187 | 3 | 6292 |
| macromolecule biosynthetic process | 6.7343E-3 | 3 | 1189 | 3 | 6292 |
| gene expression | 8.4626E-3 | 3 | 1283 | 3 | 6292 |
| ribosome biogenesis | 8.7172E-3 | 3 | 346 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA polymerase activity | 1.4421E-7 | 3 | 34 | 3 | 6292 |
| DNA-directed RNA polymerase activity | 1.4421E-7 | 3 | 34 | 3 | 6292 |
| nucleotidyltransferase activity | 1.8706E-5 | 3 | 168 | 3 | 6292 |
| transferase activity, transferring phosphorus-containing groups | 2.9545E-4 | 3 | 420 | 3 | 6292 |
| transferase activity | 2.0257E-3 | 3 | 797 | 3 | 6292 |