| From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
| Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Sof1. The topolgies of protein complexes in this experiment are unknown. |
| Complex Size: | 3 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nucleolus | 3.7195E-5 | 3 | 211 | 3 | 6292 |
| nuclear lumen | 3.709E-4 | 3 | 453 | 3 | 6292 |
| small nucleolar ribonucleoprotein complex | 3.8456E-4 | 3 | 72 | 2 | 6292 |
| nuclear outer membrane | 5.4909E-4 | 3 | 86 | 2 | 6292 |
| nuclear membrane | 6.9865E-4 | 3 | 97 | 2 | 6292 |
| organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| intracellular organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| membrane-enclosed lumen | 1.3717E-3 | 3 | 700 | 3 | 6292 |
| outer membrane | 2.3433E-3 | 3 | 178 | 2 | 6292 |
| organelle outer membrane | 2.3433E-3 | 3 | 178 | 2 | 6292 |
| nuclear envelope | 2.9239E-3 | 3 | 199 | 2 | 6292 |
| non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| intracellular non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| nuclear membrane-endoplasmic reticulum network | 3.9627E-3 | 3 | 232 | 2 | 6292 |
| nuclear part | 5.3751E-3 | 3 | 1103 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ribosome biogenesis | 1.6493E-4 | 3 | 346 | 3 | 6292 |
| ribonucleoprotein complex biogenesis | 2.0843E-4 | 3 | 374 | 3 | 6292 |
| maturation of SSU-rRNA | 2.5779E-4 | 3 | 59 | 2 | 6292 |
| rRNA processing | 1.2156E-3 | 3 | 128 | 2 | 6292 |
| cellular component biogenesis | 1.3367E-3 | 3 | 694 | 3 | 6292 |
| rRNA metabolic process | 1.3919E-3 | 3 | 137 | 2 | 6292 |
| ncRNA processing | 3.4084E-3 | 3 | 215 | 2 | 6292 |
| ncRNA metabolic process | 4.8516E-3 | 3 | 257 | 2 | 6292 |
| rRNA modification | 8.5592E-3 | 3 | 18 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| snoRNA binding | 7.0268E-5 | 3 | 31 | 2 | 6292 |
| rRNA primary transcript binding | 2.3825E-3 | 3 | 5 | 1 | 6292 |
| rRNA binding | 7.6106E-3 | 3 | 16 | 1 | 6292 |
| RNA binding | 9.7865E-3 | 3 | 367 | 2 | 6292 |