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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Nan1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RENT complex 2.5411E-3 4 4 1 6292
chromatin silencing complex 5.7106E-3 4 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pentose-phosphate shunt, oxidative branch 4.5436E-6 4 6 2 6292
pentose-phosphate shunt 1.9966E-5 4 12 2 6292
pentose metabolic process 2.3591E-5 4 13 2 6292
NADPH regeneration 3.1744E-5 4 15 2 6292
NADP metabolic process 4.6226E-5 4 18 2 6292
nicotinamide nucleotide metabolic process 2.7138E-4 4 43 2 6292
glucose catabolic process 2.8424E-4 4 44 2 6292
pyridine nucleotide metabolic process 3.1085E-4 4 46 2 6292
hexose catabolic process 3.5297E-4 4 49 2 6292
monosaccharide catabolic process 4.2906E-4 4 54 2 6292
alcohol catabolic process 4.7822E-4 4 57 2 6292
oxidoreduction coenzyme metabolic process 5.1246E-4 4 59 2 6292
cellular carbohydrate catabolic process 7.6343E-4 4 72 2 6292
carbohydrate catabolic process 8.2831E-4 4 75 2 6292
glucose metabolic process 1.7442E-3 4 109 2 6292
coenzyme metabolic process 2.1108E-3 4 120 2 6292
hexose metabolic process 2.2525E-3 4 124 2 6292
small molecule catabolic process 2.2887E-3 4 125 2 6292
nucleotide metabolic process 2.3988E-3 4 128 2 6292
nucleoside phosphate metabolic process 2.3988E-3 4 128 2 6292
monosaccharide metabolic process 2.6654E-3 4 135 2 6292
cofactor metabolic process 3.4575E-3 4 154 2 6292
nucleobase, nucleoside and nucleotide metabolic process 3.5916E-3 4 157 2 6292
alcohol metabolic process 6.97E-3 4 220 2 6292
cellular carbohydrate metabolic process 9.8029E-3 4 262 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphogluconate dehydrogenase (decarboxylating) activity 3.0316E-7 4 2 2 6292
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 7.8477E-4 4 73 2 6292
oxidoreductase activity, acting on CH-OH group of donors 9.6587E-4 4 81 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle