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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Tif2. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

eukaryotic translation initiation factor 4F complex 1.5327E-14 4 4 4 6292
ribosome 4.4241E-6 4 290 4 6292
ribonucleoprotein complex 4.4059E-5 4 514 4 6292
non-membrane-bounded organelle 5.368E-4 4 959 4 6292
intracellular non-membrane-bounded organelle 5.368E-4 4 959 4 6292
plasma membrane enriched fraction 6.3573E-4 4 1 1 6292
protein complex 1.0617E-3 4 1137 4 6292
macromolecular complex 4.5471E-3 4 1635 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translational initiation 1.7156E-9 4 42 4 6292
translation 1.2562E-5 4 376 4 6292
cellular protein metabolic process 8.4498E-4 4 1074 4 6292
protein metabolic process 1.058E-3 4 1136 4 6292
cellular macromolecule biosynthetic process 1.2614E-3 4 1187 4 6292
macromolecule biosynthetic process 1.27E-3 4 1189 4 6292
gene expression 1.7224E-3 4 1283 4 6292
cellular biosynthetic process 3.8359E-3 4 1567 4 6292
biosynthetic process 4.1907E-3 4 1602 4 6292
regulation of translational initiation 6.9763E-3 4 11 1 6292
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 6.9763E-3 4 11 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation initiation factor activity 2.69E-10 4 27 4 6292
translation factor activity, nucleic acid binding 2.0807E-9 4 44 4 6292
nucleic acid binding 1.2452E-4 4 666 4 6292
binding 1.7823E-3 4 1294 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle