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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleoid 8.248E-3 2 26 1 6292
mitochondrial nucleoid 8.248E-3 2 26 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

small molecule biosynthetic process 2.42E-3 2 310 2 6292
organic acid metabolic process 2.793E-3 2 333 2 6292
oxoacid metabolic process 2.793E-3 2 333 2 6292
carboxylic acid metabolic process 2.793E-3 2 333 2 6292
cellular ketone metabolic process 3.0157E-3 2 346 2 6292
branched chain family amino acid biosynthetic process 4.7627E-3 2 15 1 6292
branched chain family amino acid metabolic process 5.7138E-3 2 18 1 6292
glycolysis 7.9314E-3 2 25 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ketol-acid reductoisomerase activity 3.1786E-4 2 1 1 6292
glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity 9.5344E-4 2 3 1 6292
glyceraldehyde-3-phosphate dehydrogenase activity 9.5344E-4 2 3 1 6292
oxidoreductase activity 1.9877E-3 2 281 2 6292
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 6.0308E-3 2 19 1 6292
oxidoreductase activity, acting on the aldehyde or oxo group of donors 7.9314E-3 2 25 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle