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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

tyrosyl-tRNA aminoacylation 9.5344E-4 3 2 1 6292
cellular amino acid metabolic process 2.9239E-3 3 199 2 6292
cellular amine metabolic process 3.6317E-3 3 222 2 6292
amine metabolic process 4.3431E-3 3 243 2 6292
cellular amino acid and derivative metabolic process 4.3431E-3 3 243 2 6292
organic acid metabolic process 8.0851E-3 3 333 2 6292
oxoacid metabolic process 8.0851E-3 3 333 2 6292
carboxylic acid metabolic process 8.0851E-3 3 333 2 6292
cellular ketone metabolic process 8.7172E-3 3 346 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pyridoxal phosphate binding 4.768E-4 3 1 1 6292
alanine racemase activity 4.768E-4 3 1 1 6292
vitamin B6 binding 4.768E-4 3 1 1 6292
vitamin binding 4.768E-4 3 1 1 6292
racemase and epimerase activity, acting on amino acids and derivatives 9.5344E-4 3 2 1 6292
tyrosine-tRNA ligase activity 9.5344E-4 3 2 1 6292
amino-acid racemase activity 9.5344E-4 3 2 1 6292
racemase and epimerase activity 2.3825E-3 3 5 1 6292
cofactor binding 2.8585E-3 3 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle