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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

periplasmic space 4.4437E-3 4 7 1 6292
cell wall-bounded periplasmic space 4.4437E-3 4 7 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of cell size 1.8083E-3 4 111 2 6292
regulation of anatomical structure size 1.9066E-3 4 114 2 6292
regulation of cellular component size 1.9066E-3 4 114 2 6292
regulation of biological quality 2.4982E-3 4 551 3 6292
cellular response to phosphate starvation 3.1756E-3 4 5 1 6292
cellular copper ion homeostasis 4.4437E-3 4 7 1 6292
copper ion homeostasis 4.4437E-3 4 7 1 6292
phosphorus metabolic process 7.5386E-3 4 229 2 6292
phosphate metabolic process 7.5386E-3 4 229 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

acid phosphatase activity 3.0297E-6 4 5 2 6292
phosphatase activity 1.1138E-3 4 87 2 6292
phosphoric ester hydrolase activity 1.5287E-3 4 102 2 6292
cystathionine beta-lyase activity 1.9063E-3 4 3 1 6292
nucleoside-triphosphate diphosphatase activity 3.8098E-3 4 6 1 6292
carbon-sulfur lyase activity 6.3436E-3 4 10 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle