YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44
Notes: MIPS hand-curated complex set. MIPS complex ID: 440.10.30
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA cleavage and polyadenylation specificity factor complex 1.0965E-8 3 15 3 6292
mRNA cleavage factor complex 2.7472E-8 3 20 3 6292
nucleoplasm part 5.8345E-5 3 245 3 6292
nucleoplasm 7.3064E-5 3 264 3 6292
nuclear lumen 3.709E-4 3 453 3 6292
organelle lumen 1.1495E-3 3 660 3 6292
intracellular organelle lumen 1.1495E-3 3 660 3 6292
membrane-enclosed lumen 1.3717E-3 3 700 3 6292
nuclear part 5.3751E-3 3 1103 3 6292
protein complex 5.8881E-3 3 1137 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA polyadenylation 2.3352E-8 3 19 3 6292
mRNA cleavage 5.5427E-8 3 25 3 6292
RNA polyadenylation 6.2656E-8 3 26 3 6292
mRNA 3'-end processing 1.0832E-7 3 31 3 6292
RNA 3'-end processing 2.7665E-7 3 42 3 6292
nucleic acid phosphodiester bond hydrolysis 3.6582E-7 3 46 3 6292
mRNA processing 1.4956E-5 3 156 3 6292
mRNA metabolic process 3.8268E-5 3 213 3 6292
RNA processing 2.1865E-4 3 380 3 6292
RNA metabolic process 3.4763E-3 3 954 3 6292
termination of RNA polymerase II transcription, poly(A)-independent 4.2857E-3 3 9 1 6292
termination of RNA polymerase II transcription, poly(A)-coupled 4.7611E-3 3 10 1 6292
gene expression 8.4626E-3 3 1283 3 6292
termination of RNA polymerase II transcription 9.0332E-3 3 19 1 6292
transcription termination 9.9809E-3 3 21 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA binding 1.9692E-4 3 367 3 6292
nucleic acid binding 1.1811E-3 3 666 3 6292
binding 8.6823E-3 3 1294 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle