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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
LCB1
  • membrane fraction
  • microsome
  • serine C-palmitoyltransferase complex
    		•
  • sphingolipid biosynthetic process
    		•
  • serine C-palmitoyltransferase activity
    		•
    LCB2
  • membrane fraction
  • microsome
  • serine C-palmitoyltransferase complex
    		•
  • sphingolipid biosynthetic process
    		•
  • serine C-palmitoyltransferase activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    serine C-palmitoyltransferase complex 5.0527E-8 2 2 2 6292
    palmitoyltransferase complex 3.0316E-7 2 4 2 6292
    microsome 9.6001E-6 2 20 2 6292
    vesicular fraction 9.6001E-6 2 20 2 6292
    membrane fraction 2.0691E-4 2 91 2 6292
    insoluble fraction 2.0691E-4 2 91 2 6292
    cell fraction 4.1715E-4 2 129 2 6292
    endoplasmic reticulum membrane 4.4352E-4 2 133 2 6292
    endoplasmic reticulum part 5.6464E-4 2 150 2 6292
    subsynaptic reticulum 5.6464E-4 2 150 2 6292
    nuclear membrane-endoplasmic reticulum network 1.3539E-3 2 232 2 6292
    endoplasmic reticulum 3.3381E-3 2 364 2 6292
    endomembrane system 3.9918E-3 2 398 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    membrane lipid biosynthetic process 8.6401E-6 2 19 2 6292
    sphingolipid biosynthetic process 8.6401E-6 2 19 2 6292
    sphingolipid metabolic process 2.1979E-5 2 30 2 6292
    membrane lipid metabolic process 2.1979E-5 2 30 2 6292
    lipid biosynthetic process 4.2367E-4 2 130 2 6292
    cellular lipid metabolic process 8.5067E-4 2 184 2 6292
    lipid metabolic process 1.4491E-3 2 240 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    serine C-palmitoyltransferase activity 5.0527E-8 2 2 2 6292
    C-palmitoyltransferase activity 5.0527E-8 2 2 2 6292
    C-acyltransferase activity 3.0316E-7 2 4 2 6292
    palmitoyltransferase activity 2.779E-6 2 11 2 6292
    transferase activity, transferring acyl groups other than amino-acyl groups 2.1151E-4 2 92 2 6292
    acyltransferase activity 2.1151E-4 2 92 2 6292
    transferase activity, transferring acyl groups 2.8654E-4 2 107 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle