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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

AP-3 adaptor complex 1.5327E-14 4 4 4 6292
AP-type membrane coat adaptor complex 1.5343E-11 4 14 4 6292
membrane coat 1.1314E-9 4 38 4 6292
coated membrane 1.1314E-9 4 38 4 6292
membrane part 1.2155E-4 4 662 4 6292
protein complex 1.0617E-3 4 1137 4 6292
membrane 1.3089E-3 4 1198 4 6292
macromolecular complex 4.5471E-3 4 1635 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Golgi to vacuole transport 1.6287E-10 4 24 4 6292
post-Golgi vesicle-mediated transport 1.2482E-8 4 68 4 6292
vacuolar transport 1.0596E-7 4 115 4 6292
Golgi vesicle transport 4.9077E-7 4 168 4 6292
vesicle-mediated transport 8.3846E-6 4 340 4 6292
intracellular transport 5.908E-5 4 553 4 6292
establishment of localization in cell 8.1397E-5 4 599 4 6292
cellular localization 1.0815E-4 4 643 4 6292
transport 6.2722E-4 4 997 4 6292
establishment of localization 6.5541E-4 4 1008 4 6292
localization 8.0172E-4 4 1060 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle