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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

postreplication repair 7.7306E-6 2 18 2 6292
DNA repair 9.2646E-4 2 192 2 6292
histone ubiquitination 9.5344E-4 2 3 1 6292
response to DNA damage stimulus 1.4011E-3 2 236 2 6292
cellular response to stress 2.1173E-3 2 290 2 6292
cellular response to stimulus 3.6193E-3 2 379 2 6292
response to stress 6.2277E-3 2 497 2 6292
protein monoubiquitination 7.2981E-3 2 23 1 6292
DNA metabolic process 8.631E-3 2 585 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ubiquitin-protein ligase activity 8.0641E-5 2 57 2 6292
small conjugating protein ligase activity 9.5546E-5 2 62 2 6292
acid-amino acid ligase activity 1.2556E-4 2 71 2 6292
ligase activity, forming carbon-nitrogen bonds 2.2085E-4 2 94 2 6292
ligase activity 5.6464E-4 2 150 2 6292
single-stranded DNA binding 5.0798E-3 2 16 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle