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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organellar small ribosomal subunit 6.9409E-16 8 35 7 6292
mitochondrial small ribosomal subunit 6.9409E-16 8 35 7 6292
small ribosomal subunit 1.6728E-13 8 73 7 6292
organellar ribosome 7.6525E-13 8 90 7 6292
mitochondrial ribosome 7.6525E-13 8 90 7 6292
mitochondrial matrix 9.3068E-11 8 176 7 6292
mitochondrial lumen 9.3068E-11 8 176 7 6292
ribosomal subunit 1.2273E-10 8 183 7 6292
ribosome 3.1671E-9 8 290 7 6292
mitochondrial part 1.0031E-7 8 475 7 6292
ribonucleoprotein complex 1.7384E-7 8 514 7 6292
organelle lumen 9.8757E-7 8 660 7 6292
intracellular organelle lumen 9.8757E-7 8 660 7 6292
mitochondrion 1.0233E-6 8 1125 8 6292
membrane-enclosed lumen 1.4845E-6 8 700 7 6292
non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
intracellular non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
macromolecular complex 4.9027E-4 8 1635 7 6292
cytoplasmic part 5.8228E-4 8 2482 8 6292
organelle part 4.4856E-3 8 2282 7 6292
intracellular organelle part 4.4856E-3 8 2282 7 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.959E-8 8 376 7 6292
cellular protein metabolic process 2.8294E-5 8 1074 7 6292
protein metabolic process 4.153E-5 8 1136 7 6292
cellular macromolecule biosynthetic process 5.6045E-5 8 1187 7 6292
macromolecule biosynthetic process 5.6692E-5 8 1189 7 6292
gene expression 9.518E-5 8 1283 7 6292
cellular macromolecule metabolic process 3.0018E-4 8 2285 8 6292
cellular biosynthetic process 3.6841E-4 8 1567 7 6292
macromolecule metabolic process 3.7455E-4 8 2349 8 6292
biosynthetic process 4.2747E-4 8 1602 7 6292
primary metabolic process 2.0036E-3 8 2896 8 6292
cellular metabolic process 2.9013E-3 8 3033 8 6292
metabolic process 3.9991E-3 8 3157 8 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 3.478E-10 8 212 7 6292
structural molecule activity 9.4796E-9 8 339 7 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle