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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

heterogeneous nuclear ribonucleoprotein complex 9.5344E-4 2 3 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of mRNA stability 9.5344E-4 2 3 1 6292
regulation of RNA stability 9.5344E-4 2 3 1 6292
mRNA metabolic process 1.1408E-3 2 213 2 6292
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 3.4937E-3 2 11 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA binding 3.0063E-5 2 35 2 6292
poly-purine tract binding 1.5888E-3 2 5 1 6292
poly(A) RNA binding 1.5888E-3 2 5 1 6292
single-stranded RNA binding 1.5888E-3 2 5 1 6292
RNA binding 3.3934E-3 2 367 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle