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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

condensed nuclear chromosome kinetochore 1.6265E-13 6 49 6 6292
condensed chromosome kinetochore 1.6265E-13 6 49 6 6292
condensed chromosome, centromeric region 3.3719E-13 6 55 6 6292
condensed nuclear chromosome, centromeric region 3.3719E-13 6 55 6 6292
kinetochore 5.8232E-13 6 60 6 6292
chromosome, centromeric region 1.1608E-12 6 67 6 6292
condensed nuclear chromosome 5.4686E-12 6 86 6 6292
condensed chromosome 9.4706E-12 6 94 6 6292
nuclear chromosome part 7.0178E-10 6 190 6 6292
nuclear chromosome 2.1238E-9 6 228 6 6292
chromosomal part 2.6859E-9 6 237 6 6292
COMA complex 4.8163E-9 6 5 3 6292
chromosome 6.4695E-9 6 274 6 6292
non-membrane-bounded organelle 1.2371E-5 6 959 6 6292
intracellular non-membrane-bounded organelle 1.2371E-5 6 959 6 6292
nuclear part 2.8697E-5 6 1103 6 6292
protein complex 3.4445E-5 6 1137 6 6292
macromolecular complex 3.0579E-4 6 1635 6 6292
nucleus 1.1592E-3 6 2041 6 6292
outer kinetochore of condensed nuclear chromosome 1.9064E-3 6 2 1 6292
outer kinetochore of condensed chromosome 1.9064E-3 6 2 1 6292
organelle part 2.2664E-3 6 2282 6 6292
intracellular organelle part 2.2664E-3 6 2282 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromosome segregation 6.3085E-11 6 128 6 6292
microtubule anchoring 2.2727E-6 6 3 2 6292
attachment of spindle microtubules to chromosome 2.2727E-6 6 3 2 6292
attachment of spindle microtubules to kinetochore 2.2727E-6 6 3 2 6292
maintenance of protein location in cell 2.2516E-4 6 25 2 6292
maintenance of protein location 2.4382E-4 6 26 2 6292
maintenance of location in cell 2.6322E-4 6 27 2 6292
maintenance of location 2.8334E-4 6 28 2 6292
microtubule cytoskeleton organization 3.389E-3 6 97 2 6292
microtubule-based process 4.4173E-3 6 111 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein binding 1.1331E-3 6 612 4 6292
binding 1.819E-3 6 1294 5 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle