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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cell cortex 8.5271E-8 4 109 4 6292
actin cortical patch 1.0229E-6 4 41 3 6292
cytoskeleton 1.3519E-6 4 216 4 6292
cortical actin cytoskeleton 2.1179E-6 4 52 3 6292
cortical cytoskeleton 2.1179E-6 4 52 3 6292
actin cytoskeleton 9.4278E-6 4 85 3 6292
cell cortex part 1.362E-5 4 96 3 6292
cytoskeletal part 1.2549E-4 4 201 3 6292
non-membrane-bounded organelle 5.368E-4 4 959 4 6292
intracellular non-membrane-bounded organelle 5.368E-4 4 959 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

actin cytoskeleton organization 2.2273E-5 4 113 3 6292
actin filament-based process 2.4734E-5 4 117 3 6292
actin cortical patch assembly 2.7517E-5 4 14 2 6292
cortical actin cytoskeleton organization 3.1744E-5 4 15 2 6292
cortical cytoskeleton organization 3.1744E-5 4 15 2 6292
cytoskeleton organization 1.9015E-4 4 231 3 6292
actin cortical patch distribution 6.3573E-4 4 1 1 6292
actin filament organization 6.8098E-4 4 68 2 6292
regulation of endocytosis 1.9063E-3 4 3 1 6292
regulation of vesicle-mediated transport 3.8098E-3 4 6 1 6292
regulation of transport 6.9763E-3 4 11 1 6292
regulation of localization 6.9763E-3 4 11 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein binding, bridging 5.7381E-5 4 20 2 6292
protein binding 3.3984E-3 4 612 3 6292
microtubule binding 6.3436E-3 4 10 1 6292
actin filament binding 7.6087E-3 4 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle