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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrial large ribosomal subunit 1.0288E-14 8 50 7 6292
organellar large ribosomal subunit 1.0288E-14 8 50 7 6292
mitochondrial ribosome 7.6525E-13 8 90 7 6292
organellar ribosome 7.6525E-13 8 90 7 6292
large ribosomal subunit 3.2501E-12 8 110 7 6292
mitochondrial matrix 9.3068E-11 8 176 7 6292
mitochondrial lumen 9.3068E-11 8 176 7 6292
ribosomal subunit 1.2273E-10 8 183 7 6292
ribonucleoprotein complex 1.8861E-9 8 514 8 6292
ribosome 3.1671E-9 8 290 7 6292
organelle lumen 1.4108E-8 8 660 8 6292
intracellular organelle lumen 1.4108E-8 8 660 8 6292
membrane-enclosed lumen 2.2645E-8 8 700 8 6292
mitochondrial part 1.0031E-7 8 475 7 6292
non-membrane-bounded organelle 2.8409E-7 8 959 8 6292
intracellular non-membrane-bounded organelle 2.8409E-7 8 959 8 6292
macromolecular complex 2.0527E-5 8 1635 8 6292
mitochondrion 3.8859E-5 8 1125 7 6292
intracellular organelle part 2.9704E-4 8 2282 8 6292
organelle part 2.9704E-4 8 2282 8 6292
cytoplasmic part 7.7532E-3 8 2482 7 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.959E-8 8 376 7 6292
gene expression 2.9372E-6 8 1283 8 6292
cellular protein metabolic process 2.8294E-5 8 1074 7 6292
protein metabolic process 4.153E-5 8 1136 7 6292
cellular macromolecule biosynthetic process 5.6045E-5 8 1187 7 6292
macromolecule biosynthetic process 5.6692E-5 8 1189 7 6292
cellular macromolecule metabolic process 3.0018E-4 8 2285 8 6292
cellular biosynthetic process 3.6841E-4 8 1567 7 6292
macromolecule metabolic process 3.7455E-4 8 2349 8 6292
biosynthetic process 4.2747E-4 8 1602 7 6292
primary metabolic process 2.0036E-3 8 2896 8 6292
cellular metabolic process 2.9013E-3 8 3033 8 6292
ncRNA 5'-end processing 3.8101E-3 8 3 1 6292
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3.8101E-3 8 3 1 6292
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3.8101E-3 8 3 1 6292
rRNA 5'-end processing 3.8101E-3 8 3 1 6292
RNA 5'-end processing 3.8101E-3 8 3 1 6292
metabolic process 3.9991E-3 8 3157 8 6292
maturation of 5.8S rRNA 5.0773E-3 8 4 1 6292
cleavage involved in rRNA processing 5.0773E-3 8 4 1 6292
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5.0773E-3 8 4 1 6292
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5.0773E-3 8 4 1 6292
endonucleolytic cleavage involved in rRNA processing 5.0773E-3 8 4 1 6292
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5.0773E-3 8 4 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 3.478E-10 8 212 7 6292
structural molecule activity 9.4796E-9 8 339 7 6292
peptidyltransferase activity 3.8101E-3 8 3 1 6292
transferase activity, transferring amino-acyl groups 6.3431E-3 8 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle