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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organellar large ribosomal subunit 1.8787E-6 4 50 3 6292
mitochondrial large ribosomal subunit 1.8787E-6 4 50 3 6292
organellar ribosome 1.1207E-5 4 90 3 6292
mitochondrial ribosome 1.1207E-5 4 90 3 6292
large ribosomal subunit 2.0538E-5 4 110 3 6292
mitochondrial matrix 8.4323E-5 4 176 3 6292
mitochondrial lumen 8.4323E-5 4 176 3 6292
ribosomal subunit 9.4772E-5 4 183 3 6292
ribosome 3.7451E-4 4 290 3 6292
mitochondrial part 1.6146E-3 4 475 3 6292
ribonucleoprotein complex 2.0368E-3 4 514 3 6292
organelle lumen 4.2376E-3 4 660 3 6292
intracellular organelle lumen 4.2376E-3 4 660 3 6292
membrane-enclosed lumen 5.0309E-3 4 700 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrial genome maintenance 1.6892E-4 4 34 2 6292
translation 8.0953E-4 4 376 3 6292
mitochondrion organization 3.5467E-3 4 156 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.4716E-4 4 212 3 6292
structural molecule activity 5.9551E-4 4 339 3 6292
sterol 3-beta-glucosyltransferase activity 6.3573E-4 4 1 1 6292
UDP-glucosyltransferase activity 8.8726E-3 4 14 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle