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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 5.3002E-4 4 60 2 6292
cytosolic ribosome 1.499E-3 4 101 2 6292
large ribosomal subunit 1.7761E-3 4 110 2 6292
ribonucleoprotein complex 2.0368E-3 4 514 3 6292
cytosolic part 2.1811E-3 4 122 2 6292
ribosomal subunit 4.8569E-3 4 183 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of translation 4.7822E-4 4 57 2 6292
posttranscriptional regulation of gene expression 5.4787E-4 4 61 2 6292
regulation of cellular protein metabolic process 6.8098E-4 4 68 2 6292
regulation of protein metabolic process 8.0639E-4 4 74 2 6292
translation 8.0953E-4 4 376 3 6292
cellular biosynthetic process 3.8359E-3 4 1567 4 6292
biosynthetic process 4.1907E-3 4 1602 4 6292
lysine biosynthetic process via aminoadipic acid 5.0773E-3 4 8 1 6292
lysine biosynthetic process 5.7106E-3 4 9 1 6292
regulation of translational fidelity 5.7106E-3 4 9 1 6292
lysine metabolic process 5.7106E-3 4 9 1 6292
regulation of translational elongation 8.2408E-3 4 13 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.4716E-4 4 212 3 6292
structural molecule activity 5.9551E-4 4 339 3 6292
homocitrate synthase activity 1.2712E-3 4 2 1 6292
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 6.3436E-3 4 10 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle