| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 4 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| retromer complex | 2.2991E-13 | 4 | 6 | 4 | 6292 |
| endosome | 4.6741E-8 | 4 | 94 | 4 | 6292 |
| endomembrane system | 1.5784E-5 | 4 | 398 | 4 | 6292 |
| membrane part | 1.2155E-4 | 4 | 662 | 4 | 6292 |
| protein complex | 1.0617E-3 | 4 | 1137 | 4 | 6292 |
| membrane | 1.3089E-3 | 4 | 1198 | 4 | 6292 |
| macromolecular complex | 4.5471E-3 | 4 | 1635 | 4 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| retrograde transport, endosome to Golgi | 5.9409E-11 | 4 | 19 | 4 | 6292 |
| endosome transport | 4.1495E-9 | 4 | 52 | 4 | 6292 |
| vesicle-mediated transport | 8.3846E-6 | 4 | 340 | 4 | 6292 |
| protein retention in Golgi apparatus | 2.3591E-5 | 4 | 13 | 2 | 6292 |
| protein localization in Golgi apparatus | 2.3591E-5 | 4 | 13 | 2 | 6292 |
| intracellular transport | 5.908E-5 | 4 | 553 | 4 | 6292 |
| establishment of localization in cell | 8.1397E-5 | 4 | 599 | 4 | 6292 |
| maintenance of protein location in cell | 9.0505E-5 | 4 | 25 | 2 | 6292 |
| maintenance of protein location | 9.8027E-5 | 4 | 26 | 2 | 6292 |
| maintenance of location in cell | 1.0585E-4 | 4 | 27 | 2 | 6292 |
| cellular localization | 1.0815E-4 | 4 | 643 | 4 | 6292 |
| maintenance of location | 1.1396E-4 | 4 | 28 | 2 | 6292 |
| transport | 6.2722E-4 | 4 | 997 | 4 | 6292 |
| establishment of localization | 6.5541E-4 | 4 | 1008 | 4 | 6292 |
| localization | 8.0172E-4 | 4 | 1060 | 4 | 6292 |
| protein localization in organelle | 3.2394E-3 | 4 | 149 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein transporter activity | 6.503E-9 | 4 | 58 | 4 | 6292 |
| substrate-specific transporter activity | 7.9953E-6 | 4 | 336 | 4 | 6292 |
| transporter activity | 1.6762E-5 | 4 | 404 | 4 | 6292 |
| phosphatidylinositol-3-phosphate binding | 5.1654E-5 | 4 | 19 | 2 | 6292 |
| phosphoinositide binding | 2.0041E-4 | 4 | 37 | 2 | 6292 |
| phospholipid binding | 2.7138E-4 | 4 | 43 | 2 | 6292 |
| lipid binding | 3.676E-4 | 4 | 50 | 2 | 6292 |