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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic ribosome 1.5876E-5 4 101 3 6292
cytosolic part 2.8056E-5 4 122 3 6292
ribosomal subunit 9.4772E-5 4 183 3 6292
cytosol 3.5193E-4 4 284 3 6292
ribosome 3.7451E-4 4 290 3 6292
cytosolic large ribosomal subunit 5.3002E-4 4 60 2 6292
large ribosomal subunit 1.7761E-3 4 110 2 6292
ribonucleoprotein complex 2.0368E-3 4 514 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.2562E-5 4 376 4 6292
cellular protein metabolic process 8.4498E-4 4 1074 4 6292
protein metabolic process 1.058E-3 4 1136 4 6292
cellular macromolecule biosynthetic process 1.2614E-3 4 1187 4 6292
macromolecule biosynthetic process 1.27E-3 4 1189 4 6292
gene expression 1.7224E-3 4 1283 4 6292
cellular biosynthetic process 3.8359E-3 4 1567 4 6292
biosynthetic process 4.1907E-3 4 1602 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.2538E-6 4 212 4 6292
structural molecule activity 8.286E-6 4 339 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle