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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic small ribosomal subunit 5.6325E-9 5 38 4 6292
small ribosomal subunit 8.2682E-8 5 73 4 6292
cytosolic ribosome 3.0904E-7 5 101 4 6292
cytosolic part 6.6303E-7 5 122 4 6292
ribosomal subunit 3.3861E-6 5 183 4 6292
ribonucleoprotein complex 3.5735E-6 5 514 5 6292
cytosol 1.9613E-5 5 284 4 6292
ribosome 2.1316E-5 5 290 4 6292
macromolecular complex 1.1794E-3 5 1635 5 6292
non-membrane-bounded organelle 2.3579E-3 5 959 4 6292
intracellular non-membrane-bounded organelle 2.3579E-3 5 959 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 7.4317E-7 5 376 5 6292
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3.9273E-5 5 13 2 6292
cellular protein metabolic process 1.4379E-4 5 1074 5 6292
protein metabolic process 1.9046E-4 5 1136 5 6292
cellular macromolecule biosynthetic process 2.3732E-4 5 1187 5 6292
macromolecule biosynthetic process 2.3933E-4 5 1189 5 6292
gene expression 3.5034E-4 5 1283 5 6292
maturation of SSU-rRNA 8.4895E-4 5 59 2 6292
cellular biosynthetic process 9.5349E-4 5 1567 5 6292
biosynthetic process 1.065E-3 5 1602 5 6292
maturation of 5.8S rRNA 3.1756E-3 5 4 1 6292
cleavage involved in rRNA processing 3.1756E-3 5 4 1 6292
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3.1756E-3 5 4 1 6292
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3.1756E-3 5 4 1 6292
endonucleolytic cleavage involved in rRNA processing 3.1756E-3 5 4 1 6292
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3.1756E-3 5 4 1 6292
rRNA processing 3.9447E-3 5 128 2 6292
rRNA metabolic process 4.5082E-3 5 137 2 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 4.1476E-8 5 212 5 6292
structural molecule activity 4.4145E-7 5 339 5 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle