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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic ribosome 5.2025E-8 8 101 5 6292
cytosolic part 1.35E-7 8 122 5 6292
ribosomal subunit 1.0284E-6 8 183 5 6292
cytosol 9.0595E-6 8 284 5 6292
ribosome 1.004E-5 8 290 5 6292
cytosolic large ribosomal subunit 4.4633E-5 8 60 3 6292
ribonucleoprotein complex 1.6235E-4 8 514 5 6292
90S preribosome 1.9058E-4 8 17 2 6292
large ribosomal subunit 2.7317E-4 8 110 3 6292
preribosome 7.7767E-4 8 34 2 6292
cytosolic small ribosomal subunit 9.7204E-4 8 38 2 6292
non-membrane-bounded organelle 3.0487E-3 8 959 5 6292
intracellular non-membrane-bounded organelle 3.0487E-3 8 959 5 6292
small ribosomal subunit 3.5536E-3 8 73 2 6292
small-subunit processome 7.6075E-3 8 6 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.5155E-10 8 376 8 6292
cellular protein metabolic process 7.0519E-7 8 1074 8 6292
protein metabolic process 1.1064E-6 8 1136 8 6292
cellular macromolecule biosynthetic process 1.5738E-6 8 1187 8 6292
macromolecule biosynthetic process 1.5953E-6 8 1189 8 6292
gene expression 2.9372E-6 8 1283 8 6292
cellular biosynthetic process 1.4602E-5 8 1567 8 6292
biosynthetic process 1.7431E-5 8 1602 8 6292
cellular macromolecule metabolic process 3.0018E-4 8 2285 8 6292
macromolecule metabolic process 3.7455E-4 8 2349 8 6292
primary metabolic process 2.0036E-3 8 2896 8 6292
regulation of translation 2.1802E-3 8 57 2 6292
posttranscriptional regulation of gene expression 2.4935E-3 8 61 2 6292
cellular metabolic process 2.9013E-3 8 3033 8 6292
regulation of cellular protein metabolic process 3.0901E-3 8 68 2 6292
regulation of protein metabolic process 3.6499E-3 8 74 2 6292
metabolic process 3.9991E-3 8 3157 8 6292
ribosome biogenesis 7.5041E-3 8 346 3 6292
ribonucleoprotein complex biogenesis 9.3216E-3 8 374 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.4597E-12 8 212 8 6292
structural molecule activity 6.5627E-11 8 339 8 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle