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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cell cortex 2.9083E-8 7 109 5 6292
cytoskeleton 9.0439E-7 7 216 5 6292
cell cortex part 1.7203E-6 7 96 4 6292
actin cortical patch 8.8294E-6 7 41 3 6292
cortical actin cytoskeleton 1.8209E-5 7 52 3 6292
cortical cytoskeleton 1.8209E-5 7 52 3 6292
cytoskeletal part 3.2812E-5 7 201 4 6292
non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
intracellular non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
actin cytoskeleton 8.0099E-5 7 85 3 6292
cell projection 1.2171E-3 7 49 2 6292
mating projection 1.2171E-3 7 49 2 6292
eisosome 2.224E-3 7 2 1 6292
central plaque of spindle pole body 5.552E-3 7 5 1 6292
membrane raft 8.8705E-3 7 8 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

endocytosis 1.2113E-6 7 88 4 6292
membrane invagination 1.5804E-6 7 94 4 6292
cellular membrane organization 3.0919E-5 7 198 4 6292
membrane organization 3.0919E-5 7 198 4 6292
vesicle-mediated transport 2.5747E-4 7 340 4 6292
cellular component organization 1.3786E-3 7 1582 6 6292
cytoskeleton organization 1.5322E-3 7 231 3 6292
transport 1.57E-3 7 997 5 6292
establishment of localization 1.6532E-3 7 1008 5 6292
localization 2.0935E-3 7 1060 5 6292
cell budding 4.0554E-3 7 90 2 6292
asexual reproduction 4.0554E-3 7 90 2 6292
actin cytoskeleton organization 6.3297E-3 7 113 2 6292
actin filament-based process 6.7733E-3 7 117 2 6292
response to abiotic stimulus 6.7733E-3 7 117 2 6292
phosphoinositide dephosphorylation 7.7654E-3 7 7 1 6292
phospholipid dephosphorylation 7.7654E-3 7 7 1 6292
ribosomal large subunit export from nucleus 9.9746E-3 7 9 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

calcium-dependent protein binding 1.1125E-3 7 1 1 6292
cytoskeletal protein binding 1.7614E-3 7 59 2 6292
protein binding 2.4409E-3 7 612 4 6292
inositol-polyphosphate 5-phosphatase activity 3.3344E-3 7 3 1 6292
inositol trisphosphate phosphatase activity 3.3344E-3 7 3 1 6292
phosphoinositide 5-phosphatase activity 4.4437E-3 7 4 1 6292
phosphatidylinositol bisphosphate phosphatase activity 4.4437E-3 7 4 1 6292
phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity 4.4437E-3 7 4 1 6292
binding 5.2851E-3 7 1294 5 6292
calcium ion binding 7.7654E-3 7 7 1 6292
inositol or phosphatidylinositol phosphatase activity 9.9746E-3 7 9 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle