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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 9 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic ribosome 1.1557E-7 9 101 5 6292
cytosolic part 2.9904E-7 9 122 5 6292
90S preribosome 1.3628E-6 9 17 3 6292
ribosomal subunit 2.2594E-6 9 183 5 6292
preribosome 1.1847E-5 9 34 3 6292
cytosolic small ribosomal subunit 1.6654E-5 9 38 3 6292
cytosol 1.9632E-5 9 284 5 6292
ribosome 2.174E-5 9 290 5 6292
small ribosomal subunit 1.1973E-4 9 73 3 6292
ribonucleoprotein complex 3.4079E-4 9 514 5 6292
cytosolic large ribosomal subunit 3.0838E-3 9 60 2 6292
non-membrane-bounded organelle 6.0029E-3 9 959 5 6292
intracellular non-membrane-bounded organelle 6.0029E-3 9 959 5 6292
small-subunit processome 8.5551E-3 9 6 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.293E-9 9 376 8 6292
cellular biosynthetic process 3.6225E-6 9 1567 9 6292
biosynthetic process 4.4215E-6 9 1602 9 6292
cellular protein metabolic process 5.3897E-6 9 1074 8 6292
protein metabolic process 8.369E-6 9 1136 8 6292
cellular macromolecule biosynthetic process 1.1802E-5 9 1187 8 6292
macromolecule biosynthetic process 1.1959E-5 9 1189 8 6292
gene expression 2.1668E-5 9 1283 8 6292
primary metabolic process 9.2081E-4 9 2896 9 6292
cellular metabolic process 1.3966E-3 9 3033 9 6292
cellular macromolecule metabolic process 1.8315E-3 9 2285 8 6292
metabolic process 2.004E-3 9 3157 9 6292
macromolecule metabolic process 2.2547E-3 9 2349 8 6292
regulation of translation 2.7869E-3 9 57 2 6292
GTP biosynthetic process 2.859E-3 9 2 1 6292
posttranscriptional regulation of gene expression 3.186E-3 9 61 2 6292
regulation of cellular protein metabolic process 3.9454E-3 9 68 2 6292
regulation of protein metabolic process 4.6571E-3 9 74 2 6292
GTP metabolic process 9.9746E-3 9 7 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.2758E-11 9 212 8 6292
structural molecule activity 5.6299E-10 9 339 8 6292
IMP dehydrogenase activity 4.2857E-3 9 3 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle