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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cell cortex 2.8665E-6 7 109 4 6292
cytoskeleton 4.3594E-5 7 216 4 6292
cell cortex part 1.1526E-4 7 96 3 6292
actin cortical patch 8.5225E-4 7 41 2 6292
cytoskeletal part 1.0223E-3 7 201 3 6292
cell projection 1.2171E-3 7 49 2 6292
mating projection 1.2171E-3 7 49 2 6292
non-membrane-bounded organelle 1.3072E-3 7 959 5 6292
intracellular non-membrane-bounded organelle 1.3072E-3 7 959 5 6292
cortical actin cytoskeleton 1.3701E-3 7 52 2 6292
cortical cytoskeleton 1.3701E-3 7 52 2 6292
cellular bud tip 1.6447E-3 7 57 2 6292
eisosome 2.224E-3 7 2 1 6292
actin cytoskeleton 3.6246E-3 7 85 2 6292
central plaque of spindle pole body 5.552E-3 7 5 1 6292
cellular bud neck 8.188E-3 7 129 2 6292
membrane raft 8.8705E-3 7 8 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytoskeleton organization 5.6794E-5 7 231 4 6292
endocytosis 8.8864E-5 7 88 3 6292
membrane invagination 1.0824E-4 7 94 3 6292
actin cytoskeleton organization 1.8733E-4 7 113 3 6292
actin filament-based process 2.0773E-4 7 117 3 6292
vesicle-mediated transport 2.5747E-4 7 340 4 6292
cell division 3.9206E-4 7 145 3 6292
cellular membrane organization 9.7839E-4 7 198 3 6292
membrane organization 9.7839E-4 7 198 3 6292
cellular component organization 1.3786E-3 7 1582 6 6292
establishment of vesicle localization 2.224E-3 7 2 1 6292
vesicle targeting 2.224E-3 7 2 1 6292
cell cycle cytokinesis 3.2169E-3 7 80 2 6292
actomyosin structure organization 3.3344E-3 7 3 1 6292
cytokinesis, actomyosin contractile ring assembly 3.3344E-3 7 3 1 6292
assembly of actomyosin apparatus involved in cell cycle cytokinesis 3.3344E-3 7 3 1 6292
asexual reproduction 4.0554E-3 7 90 2 6292
cell budding 4.0554E-3 7 90 2 6292
cytokinetic process 4.2342E-3 7 92 2 6292
vesicle localization 4.4437E-3 7 4 1 6292
cytokinesis 6.2209E-3 7 112 2 6292
response to abiotic stimulus 6.7733E-3 7 117 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytoskeletal protein binding 2.6695E-5 7 59 3 6292
protein binding 1.5235E-4 7 612 5 6292
calcium-dependent protein binding 1.1125E-3 7 1 1 6292
myosin heavy chain binding 1.1125E-3 7 1 1 6292
myosin II heavy chain binding 1.1125E-3 7 1 1 6292
myosin V binding 1.1125E-3 7 1 1 6292
myosin II binding 2.224E-3 7 2 1 6292
binding 5.2851E-3 7 1294 5 6292
myosin binding 5.552E-3 7 5 1 6292
calcium ion binding 7.7654E-3 7 7 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle