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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.453445170944]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrial intermembrane space protein transporter complex 1.2712E-3 2 4 1 6292
presequence translocase-associated import motor 2.224E-3 2 7 1 6292
mitochondrial envelope 2.4514E-3 2 312 2 6292
mitochondrial inner membrane presequence translocase complex 3.4937E-3 2 11 1 6292
mitochondrial part 5.6881E-3 2 475 2 6292
envelope 6.43E-3 2 505 2 6292
organelle envelope 6.43E-3 2 505 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein localization in mitochondrion 6.9626E-5 2 53 2 6292
protein targeting to mitochondrion 6.9626E-5 2 53 2 6292
mitochondrial transport 1.0838E-4 2 66 2 6292
protein import 2.9194E-4 2 108 2 6292
protein localization in organelle 5.5711E-4 2 149 2 6292
mitochondrion organization 6.1087E-4 2 156 2 6292
protein targeting 1.3892E-3 2 235 2 6292
intracellular protein transport 1.6363E-3 2 255 2 6292
protein transport 1.8213E-3 2 269 2 6292
establishment of protein localization 1.8485E-3 2 271 2 6292
cellular protein localization 1.8898E-3 2 274 2 6292
cellular macromolecule localization 2.0305E-3 2 284 2 6292
protein localization 2.3118E-3 2 303 2 6292
protein import into mitochondrial inner membrane 2.5415E-3 2 8 1 6292
inner mitochondrial membrane organization 3.811E-3 2 12 1 6292
macromolecule localization 3.9717E-3 2 397 2 6292
mitochondrial membrane organization 6.9813E-3 2 22 1 6292
protein import into mitochondrial matrix 7.2981E-3 2 23 1 6292
intracellular transport 7.7118E-3 2 553 2 6292
establishment of localization in cell 9.0494E-3 2 599 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

unfolded protein binding 9.2464E-5 2 61 2 6292
protein binding 9.4468E-3 2 612 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle