From Publication:  Qiu J, Noble WS (2008) Predicting CoComplexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 
Notes:  Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.501930168904] 
Complex Size:  2 proteins 
Protein 
GO Cellular Component  GO Biological Process  GO Molecular Function 
NBP1 



SFI1 



Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the pvalue represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a pvalue less than or equal to 0.01.
GO Term 
Pvalue 
A 
B 
I 
T 
microtubule organizing center part  6.0632E6  2  16  2  6292 
microtubule organizing center  9.8679E5  2  63  2  6292 
spindle pole body  9.8679E5  2  63  2  6292 
spindle pole  1.151E4  2  68  2  6292 
spindle  1.9786E4  2  89  2  6292 
microtubule cytoskeleton  2.8118E4  2  106  2  6292 
cytoskeletal part  1.0156E3  2  201  2  6292 
cytoskeleton  1.1732E3  2  216  2  6292 
central plaque of spindle pole body  1.5888E3  2  5  1  6292 
half bridge of spindle pole body  1.5888E3  2  5  1  6292 
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the pvalue represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a pvalue less than or equal to 0.01.
GO Term 
Pvalue 
A 
B 
I 
T 
spindle pole body duplication in nuclear envelope  4.5979E6  2  14  2  6292 
spindle pole body duplication  5.3053E6  2  15  2  6292 
spindle pole body organization  6.8716E6  2  17  2  6292 
microtubule organizing center organization  6.8716E6  2  17  2  6292 
microtubule cytoskeleton organization  2.3525E4  2  97  2  6292 
microtubulebased process  3.0847E4  2  111  2  6292 
cytoskeleton organization  1.3422E3  2  231  2  6292 
cellular component assembly  3.7349E3  2  385  2  6292 
cell cycle process  6.0534E3  2  490  2  6292 
cell cycle  6.95E3  2  525  2  6292 
G2/M transition of mitotic cell cycle  9.1975E3  2  29  1  6292 
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the pvalue represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a pvalue less than or equal to 0.01.
GO Term 
Pvalue 
A 
B 
I 
T 