From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.549400659332] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
FPS1 |
|
|
|
ITR2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
plasma membrane | 1.8077E-3 | 2 | 268 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
polyol transport | 1.0611E-6 | 2 | 7 | 2 | 6292 |
organic alcohol transport | 1.4147E-6 | 2 | 8 | 2 | 6292 |
myo-inositol transport | 9.5344E-4 | 2 | 3 | 1 | 6292 |
glycerol transport | 1.2712E-3 | 2 | 4 | 1 | 6292 |
response to arsenic | 2.859E-3 | 2 | 9 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
alcohol transmembrane transporter activity | 5.0527E-7 | 2 | 5 | 2 | 6292 |
polyol transmembrane transporter activity | 5.0527E-7 | 2 | 5 | 2 | 6292 |
glycerol transmembrane transporter activity | 6.3568E-4 | 2 | 2 | 1 | 6292 |
myo-inositol transmembrane transporter activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
substrate-specific transmembrane transporter activity | 1.7943E-3 | 2 | 267 | 2 | 6292 |
transmembrane transporter activity | 2.3578E-3 | 2 | 306 | 2 | 6292 |
substrate-specific transporter activity | 2.8436E-3 | 2 | 336 | 2 | 6292 |
transporter activity | 4.1132E-3 | 2 | 404 | 2 | 6292 |